Conference publications

Abstracts

XXXIII conference

Molecular Modeling

Contents : Authors

• Федоров В.А., Холина Е.Г., Гудимчук Н.Б., Коваленко И.Б. Анализ структурно-динамических свойств бактериальных микротрубочек методами молекулярного моделирования (2026) 1 pp. (accepted)
• Боздаганян М.Е., Орехов Ф.С. Моделирование мембран хрусталика и поиск молекулярных стратегий замедления его старения (2026) 1 pp. (accepted)
• Овчинникова Ю.И., Деева А.А. Comparison of the kynetics of two types of luciferases in complex with reaction products (2026) 1 pp. (accepted)
• Холина Е.Г., Федоров В.А., Гудимчук Н.Б., Коваленко И.Б. Анализ конформационной подвижности белков FtsA, SepF (2026) 1 pp. (accepted)
• Назаренко К.М., Коробов Н.А., Марков П.Н., Назаренко Е.С., Надыкто А.Б. Конформационный поиск молекулярных кластеров (H₂SO₄)_n(NH₃)_m с автоматическим генерированием исходных данных (2026) 1 pp. (accepted)
• Степанова Е.Ю., Ивонцин Л.А., Машковцева Е.В., Нарциссов Я.Р. Исследование координации ионов в калий-хлорном котранспортере KCC2 с использованием молекулярно-динамического моделирования (2026) 1 pp. (accepted)
• Карпычева С.А., Ивонцин Л.А., Машковцева Е.В., Нарциссов Я.Р. Исследование механизма связывания глицина и ионов с переносчиком GlyT1 с помощью методов молекулярного моделирования (2026) 1 pp. (accepted)
• Abaturova A.M., Riznichenko G.Yu. Diffusion domains of cytochrome С near respiratory complexes III and IV in the mitochondrial respirasome upon binding to complex III (2026) 1 pp. (accepted)
• Bozdaganyan M.E., Orekhov P.S. Recent Advances in Coarse-Grained Simulations of Biomolecular Systems (2026) 1 pp. (accepted)
• Glushenkov A.N., Komarov V.M., Grinevich A.A. Proton localization in hydrogen bonds between nucleic base pairs (2026) 1 pp. (accepted)
• Kosarim N.A., Shaytan A.K. Effect of A40S point mutation in histone H2A on nucleosome stability and dynamics: a molecular dynamics study (2026) 1 pp. (accepted)
• Krasnobaeva L.A. On two models of nonlinear dynamics of the pTTQ18 plasmid (2026) 1 pp. (accepted)
• Naumenko M.V., Dushanov E.B., Drozhzhin N.A., Gorshkova Yu.E. Molecular dynamic modeling of sulforaphane interaction with DMPC lipid membranes (2026) 1 pp. (accepted)
• Shevelyova M.P., Deryusheva E.I., Dotsenko V.V., Dolganov A.A., Alikova V.D., Permyakov S.E., Litus E.A. Development of heterocyclic compounds capable of inhibiting fibril formation of amyloid β-peptide (2026) 1 pp. (accepted)
• Shevelyova M.P., Deryusheva E.I., Machulin A.V., Alikova V.D., Permyakov S.E., Litus E.A. Modeling of ibuprofen conjugates with enalaprilat and argatroban and their complexes with monomeric and protofibrillar forms of β-amyloid peptide (2026) 2 pp. (accepted)
• Tereshkina K.B., Tereshkin E.V., Kovalenko V.V., Loiko N.G., Krupyanskii Y.F. Comparative study of the effect of small molecules of antibiotics and anabiosis inducers on DNA and Dps protein of Escherichia coli bacteria (2026) 1 pp. (accepted)
• Timoshin G., Ulyanov E., Vinogradov D., Ataullakhanov F., Gudimchuk N. Computational modeling of microtubule force generation in optical tweezers experiments using Brownian dynamics approach (2026) 1 pp. (accepted)
• Ugryumov K.A., Vasilenko E.O., Kalyuzhny D.N., Anashkina A.A., Nechipurenko Y.D. DNA twisting in complexes with proteins: choosing metrics (2026) 2 pp. (accepted)
• Vasyuchenko E.P., Kholina E.G., Gudimchuk N.B., Kovalenko I.B. Comparative analysis of molecular docking methods for modeling the interaction of the FtsZ protein peptide with the SepF and FtsA proteins (2026) 1 pp. (accepted)
• Vdovina M., Khrenova M. Investigation of conformational transitions of K-Ras(G12D) and K-Ras(G12C) in complex with YK-8S, a novel covalent inhibitor of oncogenic K-RAS forms (2026) 1 pp. (accepted)
• Volkhin I.A., Fedorov V.A., Gudimchuk N.B., Kovalenko I.B. Mechanical properties and conformational mobility of protein filaments of TubA/B2 and FtsZ in archaea and bacteria: study using molecular dynamics (2026) 1 pp. (accepted)
• Zubova E.A., Strelnikov I.A. Cation–DNA outer sphere coordination in DNA polymorphism (2026) 1 pp. (accepted)

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